Browsing by Author "Latombe, G."
Now showing 1 - 9 of 9
Results Per Page
Sort Options
- ItemBeyond the continuum: a multi-dimensional phase space for neutral-niche community assembly(The Royal Society Publishing, 2015) Latombe, G.; Hui, C.; McGeoch, M.A.Neutral and niche processes are generally considered to interact in natural communities along a continuum, exhibiting community patterns bounded by pure neutral and pure niche processes. The continuum concept uses niche separation, an attribute of the community, to test the hypothesis that communities are bounded by pure niche or pure neutral conditions. It does not accommodate interactions via feedback between processes and the environment. By contrast, we introduce the Community Assembly Phase Space (CAPS), a multi-dimensional space that uses community processes (such as dispersal and niche selection) to define the limiting neutral and niche conditions and to test the continuum hypothesis. We compare the outputs of modelled communities in a heterogeneous landscape, assembled by pure neutral, pure niche and composite processes. Differences in patterns under different combinations of processes in CAPS reveal hidden complexity in neutral–niche community dynamics. The neutral–niche continuum only holds for strong dispersal limitation and niche separation. For weaker dispersal limitation and niche separation, neutral and niche processes amplify each other via feedback with the environment. This generates patterns that lie well beyond those predicted by a continuum. Inferences drawn from patterns about community assembly processes can therefore bemisguided when based on the continuum perspective. CAPS also demonstrates the complementary information value of different patterns for inferring community processes and captures the complexity of community assembly. It provides a general tool for studying the processes structuring communities and can be applied to address a range of questions in community and metacommunity ecology.
- ItemThe Convention on Biological Diversity (CBD)’s Post-2020 target on invasive alien species – what should it include and how should it be monitored?(2020) Essl, F.; Latombe, G.; Lenzner, B.; Pagad, S.; Seebens, H.; Smith, K.; Wilson, J.R.U.; Genovesi, P.The year 2020 and the next few years are critical for the development of the global biodiversity policy agenda until the mid-21st century, with countries agreeing to a Post-2020 Global Biodiversity Framework under the Convention on Biological Diversity (CBD). Reducing the substantial and still rising impacts of invasive alien species (IAS) on biodiversity will be essential if we are to meet the 2050 Vision where biodiversity is valued, conserved, and restored. A tentative target has been developed by the IUCN Invasive Species Specialist Group (ISSG), and formally submitted to the CBD for consideration in the discussion on the Post-2020 targets. Here, we present properties of this proposal that we regard as essential for an effective Post-2020 Framework. The target should explicitly consider the three main components of biological invasions, i.e. (i) pathways, (ii) species, and (iii) sites; the target should also be (iv) quantitative, (v) supplemented by a set of indicators that can be applied to track progress, and (vi) evaluated at medium- (2030) and long-term (2050) time horizons. We also present a proposed set of indicators to track progress. These properties and indicators are based on the increasing scientific understanding of biological invasions and effectiveness of responses. Achieving an ambitious action-oriented target so that the 2050 Vision can be achieved will require substantial effort and resources, and the cooperation of a wide range of stakeholders.
- ItemDrivers of species turnover vary with species commonness for native and alien plants with different residence times(Ecological Society of America, 2018) Latombe, G.; Richardson, D.M.; Pysek, P.; Kucera, T.; Hui, C.Communities comprising alien species with different residence times are natural experiments allowing the assessment of drivers of community assembly over time. Stochastic processes (such as dispersal and fluctuating environments) should be the dominant factors structuring communities of exotic species with short residence times. In contrast, communities should become more similar, or systematically diverge, if they contain exotics with increasing resident times, due to the increasing importance of deterministic processes (such as environmental filtering). We use zeta diversity (the number of species shared by multiple assemblages) to explore the relationship between the turnover of native species and two categories of alien species with different residence times (archaeophytes [introduced between 4000 BC and 1500 AD] and neophytes [introduced after 1500 AD]) in a network of nature reserves in central Europe. By considering multiple assemblages simultaneously, zeta diversity allows us to determine the contribution of rare and widespread species to turnover. Specifically, we explore the relative effects of assembly processes representing isolation by distance, environmental filtering, and environmental stochasticity (fluctuating environments) on zeta diversity using Multi-Site Generalized Dissimilarity Modelling (MS-GDM). Four clusters of results emerged. First, stochastic processes for structuring plant assemblages decreased in importance with increasing residence time. Environmental stochasticity only affected species composition for neophytes, offering possibilities to predict the spread debt of recent invasions. Second, native species turnover was well explained by environmental filtering and isolation by distance, although these factors did not explain the turnover of archaeophytes and neophytes. Third, native and alien species compositions were only correlated for rare species, whereas turnover in widespread alien species was surprisingly unrelated to the composition of widespread native species. Site-specific approaches would therefore be more appropriate for the monitoring and management of rare alien species, whereas species-specific approaches would suit widespread species. Finally, the size difference of nature reserves influences not only native species richness, but also their richness-independent turnover. A network of reserves must therefore be designed and managed using a variety of approaches to enhance native diversity, while controlling alien species with different residence times and degrees of commonness.
- ItemThe effect of cross-boundary management on the trajectory to commonness in biological invasions(2020) Latombe, G.; Essl, F.; McGeoch, M.A.The number of alien species introduced and undergoing range expansion in novel environments is steadily increasing, with important consequences for native ecosystems. The efficacy of management planning and decision making to limit such invasions can be improved by understanding how interventions will impact the population dynamics of recently introduced species. To do so, here we expand on a typological framework that enables the classification of populations over time into 10 categories of commonness, and apply it to a spatially discrete metapopulation with heterogeneous abundance across spatial units (patches). We use this framework to assess the effect of cross-boundary management on the capacity of a metapopulation with different demographic and dispersal characteristics, including time lags in population growth, to become common. We demonstrate this framework by simulating a simple theoretical metapopulation model capable of exploring a range of environments, species characteristics, and management actions. Management can vary in the efficacy of propagule interception between patches, and in the synchronisation of the implementation of these measures across patches (i.e. if management is implemented simultaneously across patches). Simulations show that poor interception efficacy that only modestly reduces the number of propagules entering a given spatial unit cannot be compensated for by strong management synchronisation between spatial units. Management synchronisation will nonetheless result in a reduction in rates of spread once a critical threshold of interception efficacy has been met. Finally, time lags in population growth that may result in delayed spread are an important aspect to be considered in management as they can amplify the efficacy of management. Our results demonstrate how a typological framework of categories of commonness can be used to provide practical insights for the management of biological invasions.
- ItemA four-component classification of uncertainties in biological invasions : implications for management(John Wiley & Sons, Inc, 2019) Latombe, G.; Canavan, S.; Hirsch, H.; Hui, C.; Kumschick, S.; Nsikani, M. N.; Potgieter, L. J.; Robinson, T. B.; Saul, W.-C.; Turner, S. C.; Wilson, J. R. U.; Yannelli, F. A.; Richardson, D. M.Although uncertainty is an integral part of any science, it raises doubts in public perception about scientific evidence, is exploited by denialists, and therefore potentially hinders the implementation of management actions. As a relatively young field of study, invasion science contains many uncertainties. This may explain why, despite international policies aimed at mitigating biological invasions, the implementation of national- and regional-scale measures to prevent or control alien species has done little to slow the increase in extent of invasions and the magnitude of impacts. Uncertainty is therefore a critical aspect of invasion science that should be addressed to enable the field to progress further. To improve how uncertainties in invasion science are captured and characterized, we propose a framework, which is also applicable to other applied research fields such as climate and conservation science, divided into four components: the need (1) to clearly circumscribe the phenomenon, (2) to measure and provide evidence for the phenomenon (i.e., confirmation), (3) to understand the mechanisms that cause the phenomenon, and (4) to understand the mechanisms through which the phenomenon results in consequences. We link these issues to three major types of uncertainty: linguistic, psychological, and epistemic. The application of this framework shows that the four components tend to be characterized by different types of uncertainty in invasion science.We explain how these uncertainties can be detrimental to the implementation of management measures and propose ways to reduce them. Since biological invasions are increasingly tightly embedded in complex socio-ecological systems, many problems associated with these uncertainties have convoluted solutions. They demand the consensus of many stakeholders to define and frame the dimensions of the phenomenon, and to decide on appropriate actions. While many of the uncertainties cannot be eliminated completely, we believe that using this framework to explicitly identify and communicate them will help to improve collaboration between researchers and managers, increase scientific, political, and public support for invasion research, and provide a stronger foundation for sustainable management strategies.
- ItemInvasion costs, impacts, and human agency: response to Sagoff 2020(2020) Cuthbert, R.N.; Bacher, S.; Blackburn, T.M.; Briski, E.; Diagne, C.; Dick, J.T.A.; Essl, F.; Genovesi, P.; Haubrock, P.J.; Latombe, G.; Lenzner, B.; Meinard, Y.; Pauchard, A.; Pyšek, P.; Ricciardi, A.; Richardson, D.M.; Russell, J.C.; Simberloff, D.; Courchamp, F.Article impact statement: In an era of profound biodiversity crisis, invasion costs, invader impacts, and human agency should not be dismissed.
- ItemMeasuring continuous compositional change using decline and decay in zeta diversity(2019) McGeoch, M.A.; Latombe, G.; Andrew, N.R.; Nakagawa, S.; Nipperess, D.A.; Roigé, M.; Marzinelli, E.M.; Campbell, A.H.; Vergés, A.; Thomas, T.; Steinberg, P.D.; Selwood, K.E.; Henriksen, M.V.; Hui, C.Incidence, or compositional, matrices are generated for a broad range of research applications in biology. Zeta diversity provides a common currency and conceptual framework that links incidence-based metrics with multiple patterns of interest in biology, ecology and biodiversity science. It quantifies the variation in species (or OTU) composition of multiple assemblages (or cases) in space or time, to capture the contribution of the full suite of narrow, intermediate and wide-ranging species to biotic heterogeneity. Here we provide a conceptual framework for the application and interpretation of patterns of continuous change in compositional diversity using zeta diversity. This includes consideration of the survey design context, and the multiple ways in which zeta diversity decline and decay can be used to examine and test turnover in the identity of elements across space and time. We introduce the zeta ratio-based retention rate curve to quantify rates of compositional change. We illustrate these applications using 11 empirical datasets from a broad range of taxa, scales and levels of biological organisation – from DNA molecules and microbes to communities and interaction networks – including one of the original data sets used to express compositional change and distance decay in ecology. We show (i) how different sample selection schemes used during the calculation of compositional change are appropriate for different data types and questions, (ii) how higher orders of zeta may in some cases better detect shifts and transitions, and (iii) the relative roles of rare versus common species in driving patterns of compositional change. By exploring the application of zeta diversity decline and decay, including the retention rate, across this broad range of contexts, we demonstrate its application for understanding continuous turnover in biological systems.
- ItemMulti-site generalised dissimilarity modelling: using zeta diversity to differentiate drivers of turnover in rare and widespread species(British Ecological Society, 2017) Latombe, G.; Hui, C.; McGeogh, M.A.1. Generalised dissimilarity modelling (GDM) applies pairwise beta diversity as a measure of species turnover with the purpose of explaining changes in species composition under changing environments or along environmental gradients. Beta diversity only captures turnover across pairs of sites and, therefore, disproportionately represents turnover in rare species across communities. By contrast, zeta diversity, the average number of shared species across multiple sites, captures the full spectrum of rare, intermediate and widespread species as they contribute differently to compositional turnover. 2. We show how integrating zeta diversity into GDMs (which we term multi-site generalised dissimilarity modelling, MS-GDM), provides a more information rich approach to modelling how communities respond to environmental variation and change. We demonstrate the value of including zeta diversity in biodiversity assessment and modelling using BirdLife Australia Atlas data. Zeta diversity values for different numbers of sites (the order of zeta) are regressed against environmental differences and distance using two kinds of regressions: shape constrained additive models and a combination of I-splines and generalised linear models. 3. Applying MS-GDM to different orders of zeta revealed shifts in the importance of environmental variables in explaining species turnover, varying with the order of zeta and thus with the level of co-occurrence of the species and, by extension, their commonness and rarity. In particular, precipitation gradients emerged as drivers in the turnover of rare species, whereas temperature gradients were more important drivers of turnover in widespread species. 4. Appreciation of the factors that drive compositional turnover across multiple sites is necessary for accommodating the full spectrum of compositional turnover across rare to common species. This extends beyond understanding drivers for pairwise beta diversity only. MS-GDM provides a valuable addition to the toolkit of GDM, with further potential for survey gap analysis and prediction of species composition in unsampled sites.
- ItemSimilar compositional turnover but distinct insular environmental and geographical drivers of native and exotic ants in two oceans(2019) Latombe, G.; Roura-Pascual, N.; Hui, C.Aim This study aims to quantify the patterns in compositional turnover of native and exotic ants on small islands in two oceans, and to explore whether such patterns are driven by similar environmental, geographical and potentially biotic variables. Location Pacific and Atlantic islands. Time period Present. Major taxa studied Ants. Methods We applied Multi‐Site Generalised Dissimilarity Modelling (MS‐GDM), which relates zeta diversity, the number of species shared by a given number of islands, to differences in environmental, geographical and biotic drivers. The use of zeta diversity enabled us to differentiate the contribution of rare species (shared by few islands) from those of widespread ones (shared by multiple islands) to compositional turnover. For completion, we also related species richness of insular ants per island with the same set of explanatory variables using Generalised Additive Models (GAM). Results Pacific and Atlantic islands have similar patterns of ant species turnover and richness, albeit partly driven by different drivers. Native and exotic species turnover are mostly explained by the same set of variables in the Pacific (annual precipitation and distance to the nearest island), but not in the Atlantic (annual precipitation is a good predictor of native species turnover, but none of the variables considered in our study explained exotic species turnover). No signal of biotic interactions was detected at the insular community level. Main conclusions Successful invasion strategies may depend on a combination of factors specific to the region in question. In the Pacific, milder environments and the absence of natives on certain islands enable exotic ants to select the same types of environment as native ants. In the harsher Atlantic Ocean, however, native ant species are likely to be well adapted to local environmental conditions, making it harder for exotics to become established. Exotic ant species, therefore, potentially rely on other attributes to establish, such as a combination of tolerance to a wide range of environmental conditions and human‐mediated colonization.