MicroCT imaging applied to description of a new species of Pagurus Fabricius, 1775 (Crustacea: Decapoda: Anomura: Paguridae), with selection of three-dimensional type data
| dc.contributor.author | Landschoff, Jannes | en_ZA |
| dc.contributor.author | Komai, Tomoyuki | en_ZA |
| dc.contributor.author | Du Plessis, Anton | en_ZA |
| dc.contributor.author | Gouws, Gavin | en_ZA |
| dc.contributor.author | Griffiths, Charles L. | en_ZA |
| dc.date.accessioned | 2020-05-19T10:06:42Z | |
| dc.date.available | 2020-05-19T10:06:42Z | |
| dc.date.issued | 2018 | |
| dc.description | CITATION: Landschoff, J., et al. 2018. MicroCT imaging applied to description of a new species of Pagurus Fabricius, 1775 (Crustacea: Decapoda: Anomura: Paguridae), with selection of three-dimensional type data. PLoS ONE, 13(9):e0203107, doi:10.1371/journal.pone.0203107. | |
| dc.description | The original publication is available at https://journals.plos.org/plosone/ | |
| dc.description.abstract | A new species of hermit crab, Pagurus fraserorum n. sp. (family Paguridae) is described from rocky subtidal reefs off KwaZulu-Natal, South Africa, and illustrated using both conventional drawings and colour photographs, and via three-dimensional (3D) X-ray micro-computed tomography (μCT). Because of the limitation μCT has in detecting very fine and soft structures, a novel approach of manually drawing setation and spinulation onto the twodimensional images of the 3D visualizations was used to illustrate the pereopods. In addition, an interactive figure and rotation movie clips in the supplement section complement the species description, and the 3D raw data of the 3D type data are downloadable from the Gigascience Database repository. The new species is the sixth species of Pagurus Fabricius, 1775 reported from South Africa and is closely allied to the Indo-Pacific P. boriaustraliensis Morgen, 1990 and P. pitagsaleei McLaughlin, 2002, from which it differs by its shorter ocular peduncles, by the armature of the carpus of the right cheliped, and also in colouration. This study presents the first description of a hermit crab in which a majority of taxonomic details are illustrated through 3D volume-rendered illustrations. In addition, colour photographs and COI molecular barcodes are provided, and the latter compared to COI sequences of specimens from Western Australia previously identified as P. boriaustraliensis and of specimens of P. pitagsaleei from Taiwan, as well as to three additional South African members of the genus. The South African taxon was confirmed to be genetically distinct from all species tested. | en_ZA |
| dc.description.uri | https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0203107 | |
| dc.description.version | Publisher's version | |
| dc.format.extent | 26 pages | |
| dc.identifier.citation | Landschoff, J., et al. 2018. MicroCT imaging applied to description of a new species of Pagurus Fabricius, 1775 (Crustacea: Decapoda: Anomura: Paguridae), with selection of three-dimensional type data. PLoS ONE, 13(9):e0203107, doi:10.1371/journal.pone.0203107 | |
| dc.identifier.issn | 1932-6203 (online) | |
| dc.identifier.other | doi:10.1371/journal.pone.0203107 | |
| dc.identifier.uri | http://hdl.handle.net/10019.1/108578 | |
| dc.language.iso | en_ZA | en_ZA |
| dc.publisher | Public Library of Science | |
| dc.rights.holder | Authors retain copyright | |
| dc.subject | Pagurus fabricius -- Microbiology | en_ZA |
| dc.subject | Pagurus fabricius -- Imaging | en_ZA |
| dc.subject | Hermit crabs -- Classification | en_ZA |
| dc.subject | Tomography | en_ZA |
| dc.subject | X-ray microscopy | en_ZA |
| dc.subject | Three-dimensional imaging in biology | en_ZA |
| dc.title | MicroCT imaging applied to description of a new species of Pagurus Fabricius, 1775 (Crustacea: Decapoda: Anomura: Paguridae), with selection of three-dimensional type data | en_ZA |
| dc.type | Article | en_ZA |