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3-way networks : application of hypergraphs for modelling increased complexity in comparative genomics

dc.contributor.authorWeighill, Deborah A.en_ZA
dc.contributor.authorJacobson, Daniel A.en_ZA
dc.date.accessioned2016-07-26T09:33:45Z
dc.date.available2016-07-26T09:33:45Z
dc.date.issued2015-03
dc.identifier.citationWeighill, D. A. & Jacobson, D. A. 2015. 3-way networks : application of hypergraphs for modelling increased complexity in comparative genomics. PLoS Computational Biology, 11(3): e1004079, doi:10.1371/journal.pcbi.1004079.
dc.identifier.issn1553-7358 (online)
dc.identifier.otherdoi:10.1371/journal.pcbi.1004079
dc.identifier.urihttp://hdl.handle.net/10019.1/99237
dc.descriptionCITATION: Weighill, D. A. & Jacobson, D. A. 2015. 3-way networks : application of hypergraphs for modelling increased complexity in comparative genomics. PLoS Computational Biology, 11(3): e1004079, doi:10.1371/journal.pcbi.1004079.
dc.descriptionThe original publication is available at http://journals.plos.org/ploscompbiol/
dc.description.abstractWe present and develop the theory of 3-way networks, a type of hypergraph in which each edge models relationships between triplets of objects as opposed to pairs of objects as done by standard network models. We explore approaches of how to prune these 3-way networks, illustrate their utility in comparative genomics and demonstrate how they find relationships which would be missed by standard 2-way network models using a phylogenomic dataset of 211 bacterial genomes.en_ZA
dc.format.extent23 pages, illustrations.
dc.language.isoen_ZAen_ZA
dc.publisherPLoS
dc.subject3-way networksen_ZA
dc.subjectHypergraphsen_ZA
dc.subjectComparative Genomicsen_ZA
dc.title3-way networks : application of hypergraphs for modelling increased complexity in comparative genomicsen_ZA
dc.typeArticleen_ZA
dc.description.versionPublisher's version
dc.rights.holderAuthors retain copyright


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