Masters Degrees (Conservation Ecology and Entomology)

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Browsing Masters Degrees (Conservation Ecology and Entomology) by browse.metadata.advisor "Boucher, C."

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    Assessment of fish as bio-indicators of river health in rivers of the southwestern Cape
    (Stellenbosch : Stellenbosch University, 2002-03) Hayes, Johan Barnard; Van Wyk, J. H.; Boucher, C.; Stellenbosch University. Faculty of AgriSciences. Dept. of Conservation Ecology and Entomology.
    ENGLISH ABSTRACT: In this study, the Fish Assemblage Integrity Index (FAll) was applied on three rivers within the southwestern Cape. This index uses fish as indicators of biological aquatic integrity and is based on indigenous species expected to be present in biological fish habitats. Fish integrity classes were calculated for each of the sites in the three rivers studied. Sites 2 and 4 within the Lourens River were rated as Class C, whereas sites 1 and 3 were rated as Class F and Class D respectively. Sites 1, 2 and 4 within the Palmiet River were rated Class F, whereas sites 3 and 5 were rated as Class E and Class D respectively. Site 1 within the Hout Bay River was rated as a Class F site, in addition to sites 2 and 3 been rated as Class A. It is however, suggested that the FAll needs to be adjusted to accommodate the general low species richness experienced in the southwestern Cape. In addition to the FAll been applied, the effects of long-term exposure to subtle water quality changes associated with human activities, specifically potential estrogenic compounds in fish from the Lourens River were also investigated. The production of the yolk precursor lipoprotein complex, vitellogenin (Vtg) produced in the liver under estrogen control was employed as biomarker for environmental estrogen exposure. Male fish from the Lourens River were studied using SDS-PAGE gel electrophoresis. Results indicated that 60% of male fish showed the presence of Vtg in their plasma. Abnormal gonad morphology in male and female fish were also assessed using standard histological procedures. Results from this study indicated no observed abnormalities in either male or female gonads. The immediate presence of endocrine disrupters with estrogen activity was investigated by screening water samples from the Lourens, Palmiet and Hout Bay Rivers for estrogen activity. Results indicated that none of the samples appeared to be cytotoxic. In addition, estrogen activity of water samples was also investigated by in vitro culturing of water samples with frog, Xenopus laevis, liver slices. Results indicated that none of the water samples from the three rivers studied indicated estrogenic activity. Although cytotoxicity and estrogen activity results were negative, the production of Vtg in male fish suggests further research regarding the presence of estrogenic substances in these rivers.
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    Effects of gaseous emissions from the Namakwa Sands Mineral Separation Plant near Lutzville on the adjacent succulent Karoo vegetation : a pilot study
    (Stellenbosch : University of Stellenbosch, 2006-03) Lukama, Beatice M. K.; Milton, S. J.; Boucher, C.; Botha, A. T.; University of Stellenbosch. Faculty of Agrisciences. Dept. of Conservation Ecology and Entomology.
    A pilot study was conducted at the Namakwa Sands Mineral Separation Plant, to investigate the effects of acidic gaseous emissions from the Mineral Separation Plant on the adjacent Succulent Karoo vegetation. Sulphuric acid fumes, a major gaseous emission of the mineral processing, was the subject of investigation of the present study, due to the potential high negative impact of elevated concentrations thereof on vegetation in the ecosystem. Permanent sample plots along three transects radiating from the Mineral Separation Plant were laid out in the eastern, south-eastern and southern directions following the prevailing wind directions and practical consideration of land accessibility. The ecological components assessed as indicators of possible pollution levels in the environment included percentage plant mortality, foliar sulphur content of selected plant species, chemical composition of solubles in mist and dust samples, and soil pH. In addition, the vegetation was screened for plant species suitable to be used as potential bioindicators. Potential bioindicator plant species were selected on the basis of their relatively wide distribution in the study area and apparent sensitivity to the ambient air pollutants. The percentage of dead plants of each species that occurred on the sample plots was used as a criterion of the possible sensitivity of the plant species towards air pollution. The bioindicator plant species selected for potential monitoring purposes were: Galenia fruticosa, Lampranthus suavissimus, Lycium ferocissimum and a Ruschia sp. (SP 9). Plant mortality was greater nearer the emission source, with 28 + 5 % dead plants at 400 m, 19 + 6 % at 800 m and only 10 + 4 % at 1,200 m from the Mineral Separation Plant. Data summed for all species recorded and pooled for all three transects per sampling distance. With the methods used in this study, in the case of all sample plots on the three transects, no significant difference was found between the mean pH values of soil samples collected from open spaces without plant cover (8.01 + 0.46) and those collected underneath shrubs (8.91 + 0.96). Subsequently only the pH values of soil samples collected on open spaces were used to investigate the variation in soil acidity with distance and direction from the emission source. The means represent total number of samples from open space versus those collected from underneath shrubs. The pH of soil samples increased with distance from the emission source along the transects to the south and south-east of the emission source. Eastward of the emission source, soil pH values remained relatively low at all sample distances. This pilot study could not determine whether the continuous acidity of the soil along the eastern transect in the direction of the prevailing wind, was caused by increased deposition of gaseous emissions on the higher lying hilly terrain in this area, or by the underlying geology. Ion chromatographic analysis of mist and dust samples collected on each sample plot indicated the presence of several chemicals that had probably originated from the gaseous emissions from the Mineral Separation Plant as well as wind blown constituents from the adjacent surroundings of the sample plots. Of these chemicals, only the sulphate concentrations of the mist and dust samples were further evaluated, since that could be related to the emission of sulphuric acid fumes by the Mineral Separation Plant. Results indicated that the mean sulphate concentration of mist and dust samples collected from sample plots relatively close to the Mineral Separation Plant, 118.8 + 31.6 mg/litre (400 m), were higher than further afield, decreasing to 57 + 30.1 mg/litre at 800 m and 43.1 + 19.6 mg/litre at 1,200 m. These values, representing the mean sulphate concentrations of mist and dust samples at each sampling distance (data of the three transects pooled), differ significantly at the 85 % confidence level. Statistical evaluation of the data of the mist and dust pH measurements, pooled for the three transects on the basis of distance, indicated a gradual increase of the mean values from 400 m (7.3 + 0.26), through 800 m (7.7 + 0.34), to 1,200 m (8.2 + 0.83), although these values were not significantly different. A decreasing trend in accordance with that in the case of the sulphate concentrations of mist and dust samples with distance from the mineral processing plant, was also observed in the sulphur content of the leaves of selected plant species, with mean sulphur content higher at 400 m sampling distance (0.29 + 0.091 %) than at 800 m (0.264 + 0.086 %) and a further decline at 1,200 m (0.232 + 0.079 %), data of the three transects pooled. However, these values were also not significantly different. Although not significantly so, the decreasing trend in the results of the sulphate concentration of mist and dust samples, the sulphur content of plant leaf samples as well as plant mortality observed, and increasing soil pH values with distance from the Mineral Separation Plant, suggest that the gaseous emissions from the Mineral Separation Plant could probably have had a detrimental effect on the adjacent Succulent Karoo vegetation. A more detailed study is necessary to confirm this trend. In addition it is recommended that in order to clarify the soil pH measurements outcome along the eastern transect that were contradicted by the results of the mist and dust pH measurements, a more intensive survey over a greater distance (at least further than 1.2 km from the Mineral Separation Plant), be conducted to quantify vegetation damage and acid deposition to the east of the emission source.
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    Rapid bioassessment of the ecological integrity of the Lourens, Palmiet and Hout Bay Rivers (South Western Cape, South Africa) using aquatic macroinvertebrates
    (Stellenbosch : Stellenbosch University, 2005-12) Ollis, Dean Justin; Boucher, C.; Esler, Karen J.; Stellenbosch University. Faculty of Agrisciences. Dept. of Conservation Ecology and Entomology.
    ENGLISH ABSTRACT: The primary aim of this study was to assess and compare the ecological integrity of the Lourens, Palmiet and Hout Bay Rivers (South Western Cape, South Africa) by examining the macroinvertebrate community structure at a series of representative sampling sites along the course of each river, using the South African Scoring System - Version 5 (SASS-5) rapid bioassessment method. Secondary aims included an examination of the effects of seasonal variability, biotope availability and site-specific environmental variables on the macroinvertebrate community structure at sampling sites, as well as the preliminary testing of the Integrated Habitat Assessment System (IHAS) for aquatic macroinvertebrates. According to results obtained, the ecological integrity of sampling sites in the Mountain Stream Zone of the three rivers was consistently good. The Hout Bay River in the upper portions of the Orange Kloof Reserve was particularly near-pristine, with this area having been identified in this study as a potential biodiversity ‘hot-spot’ for aquatic macroinvertebrates. Downstream of the Mountain Stream Zone, there was a significant deterioration in the ecological integrity of all three rivers due to a number of probable causes. Results based on recorded SASS Scores and Average Score per Taxon (ASPT) values, using ‘biological bands’ generated from reference sites in the South Western Cape, were generally similar to and supported by the corresponding multivariate analyses undertaken. From the results of the various analyses undertaken in this investigation and some of the problems encountered in interpreting the data, a number of recommendations are made regarding future bioassessment studies based on the SASS within the national River Health Programme (RHP). To test the IHAS, secondary data were obtained from reference sites in the Mpumalanga and Western Cape Provinces of South Africa. Assuming that SASS Scores at reference sites are the highest scores attainable, one would expect to find a positive relationship between SASS Scores and IHAS scores at reference sites. The assumption in this investigation was that this relationship should be linear. Non-parametric correlation analyses were undertaken between SASS-4/5 Scores and IHAS scores, using Kendall’s Rank-correlation Coefficient (τ), with separate analyses undertaken for different geomorphological zones and biotope groups. Correlations between SASS Scores and IHAS scores were generally weak (τ-values mostly < 0.3) and unsatisfactory, with no significant correlations (p < 0.05) for two-thirds of the data sets analysed and a wide degree of scatter generally observed amongst data points in respective scatter plots. The performance of the IHAS varied between geomorphological zones and biotope groups, with the Foothill: Gravel-bed Zone in Mpumalanga showing the best results, particularly when the stones-in-current biotope group was analysed separately. Further testing of the IHAS is required to confirm its relative performance in different bioregions/ecoregions, geomorphological zones and biotope groups, which should be undertaken as a priority research area within the RHP. Unsuccessful attempts to test the IHAS by means of multiple regression analyses were undertaken, suggesting that such techniques should be avoided in further testing of the IHAS.